CREAM Publications
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In the following, publications are listed that are related to CREAM’s research, and authored by CREAM members. Publications about research directly funded through CREAM are marked by asterisks (this includes all publications by CREAM fellows).
2012
* Annika Agatz, Monika Hammers-Wirtz, Faten Gabsi, Hans-Toni Ratte, Colin D. Brown, Thomas G. Preuss (2012) Promoting effects on reproduction increase population vulnerability of Daphnia magna. Environmental Toxicology and Chemistry. dx.doi.org/10.1002/etc.1862
* Jager T, Zimmer EI (2012). Simplified Dynamic Energy Budget model for analysing ecotoxicity data. Ecological Modelling, 225: 74-81 DOI: 10.1016/j.ecolmodel.2011.11.012
* Martin BT, Zimmer, EI, Grimm V & Jager T (in press) Dynamic Energy Budget theory meets inidvidual-based modelling: a generic and accessible implementation. Methods in Ecology and Evolution DOI: 10.1111/j.2041-210X.2011.00168.x
* Nyman A-M, Schirmer K & Ashauer R (2012). Toxicokinetic-toxicodynamic modelling of survival of Gammarus pulex in multiple pulse exposures to propiconazole: model assumptions, calibration data requirements and predictive power. Ecotoxicology DOI: 10.1007/s10646-012-0917-0
* Stadnicka J, Schirmer K & Ashauer R (2012). Predicting Concentrations of Organic Chemicals in Fish by Using Toxicokinetic Models. Environmental Science and Technology DOI: 10.1021/es2043728
* Hamda NT, Jevtic DM, Laskowski, R (2012) Decomposition analysis of LTREs may help to design short-term ecotoxicological tests. Ecotoxicology. DOI: 10.1007/s10646-012-0904-5.
2011
*Ashauer R, Agatz A, Albert C, Ducrot V, Galic N, Hendriks A J, Jager T, Kretschmann A, O’Connor I, Rubach M N, Nyman A-M, Schmitt W, Stadnicka J, van den Brink P J & Preuss TG (2011). Toxicokinetic-toxicodynamic modelling of quantal and graded sub-lethal endpoints: a brief discussion of concepts. Environmental Toxicology and Chemistry 30: 2519-2524.
* Hernout B, Arnold K, McClean C, Grimm V , Boxall ABA (2011). Predicting the threats of chemicals to wildlife: what are the challenges? Integrated Environmental Assessment and Management, 7:499-501.
* Jager T, Albert C, Preuss TG & Ashauer R (2011). General Unified Threshold Model of Survival – a Toxicokinetic-Toxicodynamic Framework for Ecotoxicology. Environmental Science & Technology, 45 : 2529-2540. DOI: 10.1021/es103092a
* Jager T, Selck H (2011). Interpreting toxicity data in a DEB framework: a case study for nonylphenol in the marine polychaete Capitella teleta. Journal of Sea Research, 66: 456-462. DOI: 10.1016/j.seares.2011.04.003
.2010
* Jager T & Klok C (2010) Extrapolating toxic effects on individuals to the population level: the role of dynamic energy budgets. Philosophical Transactions of the Royal Society Biological Sciences, 365: 3531 – 3540. DOI: 10.1098/rstb.2010.0137
Schmolke A, Thorbek P, DeAngelis DL & Grimm V (2010). Ecological models supporting environmental decision making: a strategy for the future. Trends in Ecology & Evolution, 25: 479-486. DOI: 10.1016/j.tree.2010.05.001
2009
Grimm V, Ashauer R, Forbes V, Hommen U, Preuss TG, Schmidt A, van den Brink PJ, Wogram J & Thorbek P (2009). CREAM: a European project on mechanistic effect models for ecological risk assessment of chemicals. Environmental Science & Pollution Research, 16: 614-617
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Other publications
2012
Grimm V & Railsback SF (2012) Pattern-oriented modelling: a “multiscope” for predictive systems ecology. Philosophical Transactions Royal Society London B 367: 298-310.
Railsback SF & Grimm V (2012) Agent -Based and Individual-Based Modeling: A Practical Introduction. Princeton. University Press, Princeton, N.J.
Thiele JC, Kurth W & Grimm V. (in press) RNetLogo: an R package for running and exploring individual-based models implemented in NetLogo. Methods in Ecology and Evolution. DOI: 10.1111/j.2041-210X.2011.00180.x
Meredith-Williams M, Carter LJ, Fussell R, Raffaelli D, Ashauer R, Boxall ABA (in press) Uptake and depuration of pharmaceuticals in aquatic invertebrates. Environmental Pollution. doi:10.1016/j.envpol.2011.11.029
2011
Forbes VE, Calow P, Grimm V, Hayashi T, Jager T, Katholm A, Palmqvist A, Pastorok R, Salvito D, Sibly RM, Spromberg J, Stark J & Stillman RA (2011). Adding value to ecological risk assessment with population modeling. Human and Ecological Risk Assessment 17: 287-299. DOI: 10.1080/10807039.2011.552391
2010
Ashauer R & Escher BI (2010). Advantages of toxicokinetic and toxicodynamic modelling in aquatic ecotoxicology and risk assessment. Journal of Environmental Monitoring, 12: 2056-2061
Ducrot V, Teixeira-Alves M, Lopes C, Delignette-Muller ML, Charles S & Lagadic L (2010). Development of partial life-cycle experiments to assess the effects of endocrine disruptors on the freshwater gastropod Lymnaea stagnalis: a case-study with vinclozolin. Ecotoxicology, 19: 1312-1321. DOI: 10.1007/s10646-010-0518-8
Ducrot V, Péry ARR & Lagadic L (2010). Modelling effects of diquat under realistic exposure patterns in genetically differentiated populations of the gastropod Lymnaea stagnalis. Philosophical Transactions of the Royal Society B, 365: 3485–3494. DOI: 10.1098/rstb.2010.0047
Ducrot V, Billoir E, Péry ARR, Garric J & Charles S (2010). From Individual to Population Level
Effects of Toxicants in the Tubicifid Branchiura sowerbyi Using Threshold Effect Models in a Bayesian Framework. Environmental Science & Technology, 44: 3566–3571. DOI: 10.1021/es903860w
Forbes VE, Calow P, Grimm V, Hayashi T, Jager T, Palmqvist A, Pastorok R,
Salvito D, Sibly R, Spromberg J, Stark J, Stillman R (2010). Integrating
population modeling into ecological risk assessment. Integrated
Environmental Assessment and Management, 6: 191-193.
Forbes VE, Olsen M, Palmqvist A & Calow P (2010). Environmentally sensitive life-cycle traits have low elasticity: implications for theory and practice. Ecological Applications, 20: 1449-1455.
Galic N, Hommen U, Baveco JMH & van den Brink PJ (2010). Potential Application of Population Models in the European Ecological Risk Assessment of Chemicals II: Review of Models and Their Potential to Address Environmental Protection Aims Integrated Environmental Assessment and Management, 6: 338-360.
Grimm V, Berger U, DeAngelis DL, Polhill G, Giske J, Railsback SF (2010). The
ODD protocol: a review and first update. Ecological Modelling, 221:
2760-2768.
Heckmann, LH, Baas J, Jager T (2010). Time is of the essence. Environmental Toxicology and Chemistry, 29(6):1396-1398. DOI: 10.1002/etc.163
Hommen U, Baveco JMH, Galic N & van den Brink PJ (2010). Potential Application of Ecological Models in the European Environmental Risk Assessment of Chemicals I: Review of Protection Goals in EU Directives and Regulations Integrated Environmental Assessment and management, 6: 325-337.
Preuss TG, Hammers-Wirtz M & Ratte HT (2010): The potential of individual based population models to extrapolate effects measured at standardized test conditions to environmental relevant conditions – an example for 3,4-dichloroaniline on Daphnia magna. Journal of Envrionmental Monitoring, 12: 2070-2079. DOI: 10.1039/c0em00096e
Schmolke A, Thorbek P, Chapman P & Grimm V (2010). Ecological Models and pesticide risk assessment: current modeling practice. Environmental Toxicology & Chemistry, 29: 1006-1012. DOI: 10.1002/etc.120
Thorbek P, Forbes V, Heimbach F, Hommen U, Thulke HH, van den Brink P, Wogram J & Grimm V (eds). Ecological models for regulatory risk assessments of pesticides: developing a strategy for the future. Society of Environmental and Chemistry (SETAC) and CRC Press, 2010.
Wang M & Grimm V (2010). Population models in pesticide risk assessment: Lessons for assessing population-level effects, recovery, and alternative exposure scenarios from modeling a small mammal. Environmental Toxicology and Chemistry, 29, 1292-1300.
2009
Forbes VE, Hommen U, Thorbek P, Heimbach F, van den Brink PJ, Wogram J, Thulke HH & Grimm V (2009). Ecological Models in Support of Regulatory Risk Assessments of Pesticides: Developing a Strategy for the Future. Integrated Environmental Assessment and Management, 5 (1): 167-172
Preuss TG, Hammers-Wirtz M, Hommen U, Rubach MN & Ratte HT (2009): Development and validation of an individual based Daphnia magna population model: The influence of crowding on population dynamics. Ecological Modelling, 220: 310-329. DOI:10.1016/j.ecolmodel.2008.09.018
